Mukesh Khanore

Mukesh Khanore

Computational Physicist & PhD Researcher

I build machine-learning interatomic potentials that make large-scale atomistic simulations of ferroelectric perovskites run orders of magnitude faster while keeping ab-initio accuracy. My work spans model training, scientific software development and high-performance computing on national and European supercomputers.

I am a computational physicist finishing a PhD at Charles University and the Institute of Physics of the Czech Academy of Sciences. My research trains machine-learned interatomic potentials on ab-initio data so that simulations which would take weeks of DFT can run in hours without giving up quantum-level accuracy.

Before returning to academia I spent two years in industry as a data scientist and analyst — leading small teams, building forecasting models for electricity demand and renewable generation, and turning messy operational data into something decision-makers could act on.

Day to day I work in Python and FORTRAN on Slurm clusters, with a background in numerical methods, sparse linear algebra and GPU workflows. I have published on strongly correlated electrons, ultracold atoms in optical lattices, and the energy landscapes of perovskites.

Experience

  1. Oct 2022 – Present

    PhD Researcher

    Institute of Physics, Czech Academy of Sciences

    • Developing a machine-learning approach to accelerate large-scale atomistic simulations of ferroelectric perovskites while retaining ab-initio accuracy.
    • Fine-tune GRACE machine-learned interatomic potentials on curated VASP MLFF datasets; validate against DFT energies, forces, phonons and phase diagrams.
    • Presented results at the 15th European Meeting on Ferroelectricity (Katowice, 2025), the XXVI Czech–Polish seminar (Milovy, 2026) and the E-MRS fall meeting (Warsaw, 2026).
  2. Feb 2022 – Aug 2022

    Senior Data Analyst

    Sourcelink Software, Inc. (dba Dosii)

    • Led the data analytics team; owned data extraction, cleaning and validation pipelines.
    • Designed and applied predictive algorithms and presented insights to stakeholders and management.
  3. Dec 2020 – Oct 2021

    Deputy Manager (Data Science)

    Regent Climate Connect Knowledge Solutions Pvt. Ltd.

    • Managed the weather-forecasting team; responsible for error analysis and integration of data from multiple forecast providers.
    • Contributed to machine-learning weather models for electricity demand and renewable (solar and wind) power forecasting.
  4. Oct 2019 – May 2020

    Consultant

    Skymet Weather Services Pvt. Ltd.

    • Developed a parameter-based mathematical model in FORTRAN for weather-optimal ship routing based on forecast data.
  5. Aug 2013 – Aug 2019

    Project Assistant

    Department of Physics, S. P. Pune University

    • Studied ground-state properties of ultracold atoms in rotating optical lattices via the extended Bose–Hubbard model, using both analytical and numerical methods.
    • Implemented large sparse-matrix exact diagonalization with the Davidson algorithm for Hilbert spaces of dimension 10⁷.

Education

  1. Expected 2026/2027

    PhD in Physics

    Charles University, Prague

    Faculty of Mathematics and Physics.

  2. August 2013

    M.Sc. in Physics

    University of Pune

    Department of Physics.

  3. B.Sc. in Physics

    S. P. College, University of Pune

Projects

PDF to BibTeX

Automation Tool

Scans a folder of paper PDFs, extracts the DOI embedded in each one and resolves it into a formatted BibTeX entry. Built to keep a growing LaTeX bibliography in sync with a reference library without retyping citations by hand.

PythonLaTeXBibTeXDOI

Descriptors Visualization

Materials Science

Desktop GUI for generating structural descriptors from atomic configurations and plotting them interactively. Used to sanity-check the feature representations that go into machine-learned interatomic potentials before training.

PythonGUIDescriptorsMaterials Science

1D Hubbard Model

Physics Simulation

Numerical solver for the one-dimensional Hubbard model of correlated electrons, computing ground-state properties across the interaction strength range. A compact reference implementation of the exact-diagonalization approach used in my published work.

PythonExact DiagonalizationCondensed Matter

Qiskit Testing

Quantum Computing

Working notebooks exploring IBM's Qiskit framework — circuit construction, measurement and simulator backends — as a way into quantum algorithms for many-body problems.

QiskitPythonQuantum Circuits

Percolation Project

Statistical Mechanics

Monte Carlo study of percolation on lattices: locating the critical threshold, tracking cluster growth and visualising how connectivity emerges as site occupation increases.

PythonMonte CarloStatistical Mechanics

Map Plotting Python

Data Visualisation

Plotting utilities for geospatial forecast data, producing publication-quality maps of gridded fields. Written during my weather-forecasting work, where every model run needed a readable spatial view.

PythonMatplotlibGeospatial

Gridded Data

Data Processing

Routines for reading, regridding and subsetting grid-based scientific datasets, so that outputs from different forecast providers on different grids can be compared on common ground.

PythonNumPyData Pipelines

Any Base Number Representation

Algorithms

Small library for converting numbers between arbitrary bases in both directions, including fractional parts — the kind of primitive that turns up repeatedly in encoding and indexing problems.

PythonAlgorithmsNumber Theory

Remote Access

HPC Utilities

Helper scripts for working on remote compute clusters: opening connections, moving job files and retrieving results, cutting the boilerplate out of a daily HPC workflow.

ShellSSHHPC

Skills

Programming

  • Python
  • FORTRAN
  • C
  • Julia
  • SQL
  • Mathematica
  • LaTeX
  • gnuplot
  • Qiskit

Simulation & Tools

  • VASP (DFT, MLFF)
  • LAMMPS
  • ASE
  • Phonopy
  • GRACE / ACE-type MLIPs
  • TensorFlow
  • scikit-learn
  • Graph neural networks
  • Slurm / PBS clusters
  • Singularity / Apptainer
  • Git
  • Linux
  • Google Cloud

Research & Physics

  • Density functional theory
  • Machine-learned interatomic potentials
  • Ferroelectric perovskites
  • Strongly correlated electrons
  • Ultracold atoms in optical lattices
  • Exact diagonalization
  • Phonon and phase-diagram calculations
  • Numerical methods and sparse linear algebra

Conferences

XXVI Czech–Polish seminar

4-8 May 2026

Presented “Deep Learning Frameworks for Exploration of Energy Landscapes of Perovskites”. Milovy, Czech Republic.

The 15th European Meeting on Ferroelectricity

31 Aug-5 Sep 2025

Poster: “Machine-learning-based Investigation of the Energy Landscape of PbTiO₃, BaTiO₃ and CaTiO₃”. International Congress Centre (ICC), Katowice, Poland.

Workshop on Classical & Quantum Machine Learning for Condensed Matter Physics

19-21 Jun 2024

Online workshop organized by ICTP Trieste, Italy.

e-INFRA CZ CONFERENCE

29-30 Apr 2024

Hotel Occidental Praha, Prague.

Introductory School on Parallel Programming and Architecture

3-14 Oct 2016

ICTP, Miramare, Trieste, Italy.

Teaching experience

Visiting Faculty

Interdisciplinary School of Science, SPPU

Taught Quantum Mechanics, Statistical Mechanics and Subatomic Physics to second-year B.Sc. students on the blended course.

Visiting Faculty

School of Bioengineering Science and Research, MIT-ADT University

Delivered Basic Mechanical Engineering lectures and practicals to first-year B.Tech and M.Tech students, through December 2020.

Contact

Interested in collaboration? Feel free to reach out.

Get in Touch